STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOE60947.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (2421 aa)    
Predicted Functional Partners:
AOE65180.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.989
AOE65183.1
Peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.986
AOE60907.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
0.984
AOE60384.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.971
AOE65181.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
0.938
AOE60911.1
Thioester reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
0.765
AOE65177.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.752
AXG94_03670
Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.745
AOE63242.1
Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.745
AOE65179.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.736
Your Current Organism:
Pseudomonas corrugata
NCBI taxonomy Id: 47879
Other names: ATCC 29736, CCUG 23367, CCUG 32778, CFBP 2431, CIP 105514, DSM 7228, ICMP 5819, LMG 2172, LMG:2172, NCPPB 2445, P. corrugata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.