Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AOE63317.1Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)    
Predicted Functional Partners:
AOE62252.1
Phospholipid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.912
AOE64402.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.892
AOE64208.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.850
AOE64201.1
Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.823
AOE64148.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.787
AOE63316.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
       0.758
AOE64203.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.731
AOE63192.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.724
AOE63190.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.711
AOE62700.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.704
Your Current Organism:
Pseudomonas corrugata
NCBI taxonomy Id: 47879
Other names: ATCC 29736, CCUG 23367, CCUG 32778, CFBP 2431, CIP 105514, DSM 7228, ICMP 5819, LMG 2172, LMG:2172, NCPPB 2445, P. corrugata
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