STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOE64206.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa)    
Predicted Functional Partners:
AOE64203.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.930
AOE64204.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.928
AOE64201.1
Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.912
AOE64202.1
Baseplate J protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.895
AOE64208.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.892
AOE64200.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.878
AOE64209.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.866
AOE64205.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.774
AOE64213.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.724
AOE64198.1
Pyocin R2, holin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.706
Your Current Organism:
Pseudomonas corrugata
NCBI taxonomy Id: 47879
Other names: ATCC 29736, CCUG 23367, CCUG 32778, CFBP 2431, CIP 105514, DSM 7228, ICMP 5819, LMG 2172, LMG:2172, NCPPB 2445, P. corrugata
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