STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV05521.1Cell wall-associated hydrolase, invasion-associated protein; PFAM: Putative peptidoglycan binding domain; Predicted Peptidoglycan domain; NlpC/P60 family; Bacterial SH3 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence. (422 aa)    
Predicted Functional Partners:
ACV05413.1
Cell wall-associated hydrolase, invasion-associated protein; PFAM: NlpC/P60 family; Glycosyl transferase family 2.
 
  
 0.624
ACV05523.1
PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain.
  
    0.543
ACV05522.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase.
       0.538
ACV07143.1
SH3 domain-containing protein; PFAM: D-alanyl-D-alanine carboxypeptidase; Bacterial SH3 domain.
  
  
0.463
ACV07248.1
SH3 domain-containing protein; PFAM: Bacterial SH3 domain.
  
  
 0.463
ACV06563.1
Cell wall-associated hydrolase, invasion-associated protein; PFAM: NlpC/P60 family.
 
   
 0.429
ACV05524.1
Hypothetical protein.
       0.407
Your Current Organism:
Kytococcus sedentarius
NCBI taxonomy Id: 478801
Other names: K. sedentarius DSM 20547, Kytococcus sedentarius DSM 20547, Kytococcus sedentarius str. DSM 20547, Kytococcus sedentarius strain DSM 20547
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.