STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV05542.1Hypothetical protein. (157 aa)    
Predicted Functional Partners:
ACV07300.1
PFAM: Fatty acid desaturase.
  
  
 0.722
ACV05543.1
Hypothetical protein.
       0.701
ACV05544.1
Phospholipid-binding protein, PBP family; PFAM: Phosphatidylethanolamine-binding protein; TIGRFAM: conserved hypothetical protein TIGR00481.
       0.701
ACV07301.1
Flavodoxin reductase family protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain.
 
    0.595
ACV05541.1
PFAM: Protein of unknown function DUF88; TIGRFAM: conserved hypothetical protein TIGR00288.
  
    0.567
ACV06529.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: AMP-binding enzyme; TIGRFAM: non-ribosomal peptide synthetase terminal domain of unknown function; amino acid adenylation domain.
 
 
 0.536
ACV05546.1
Predicted amino acid aldolase or racemase; PFAM: Alanine racemase, N-terminal domain.
  
    0.473
ACV05545.1
TIGRFAM: conserved hypothetical protein TIGR03086; uncharacterized Actinobacterial protein TIGR03083.
       0.470
ACV06811.1
PFAM: Ion channel.
  
     0.467
ACV06823.1
PFAM: 2OG-Fe(II) oxygenase superfamily.
  
    0.437
Your Current Organism:
Kytococcus sedentarius
NCBI taxonomy Id: 478801
Other names: K. sedentarius DSM 20547, Kytococcus sedentarius DSM 20547, Kytococcus sedentarius str. DSM 20547, Kytococcus sedentarius strain DSM 20547
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.