STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV05615.1Penicillin-binding protein, beta-lactamase class C; PFAM: Beta-lactamase. (380 aa)    
Predicted Functional Partners:
ACV06084.1
Penicillin-binding protein, beta-lactamase class C; PFAM: Beta-lactamase.
  
     0.730
ACV05238.1
Penicillin-binding protein, beta-lactamase class C; PFAM: Beta-lactamase.
  
     0.561
ACV05614.1
RNA polymerase sigma-70 factor, TIGR02960 family; PFAM: Sigma-70 region 2; Sigma-70, region 4; Nuclear transport factor 2 (NTF2) domain; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, TIGR02960 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.509
ACV05612.1
Ketosteroid isomerase-like enzyme; TIGRFAM: conserved hypothetical protein.
       0.496
ACV05613.1
TIGRFAM: conserved hypothetical protein.
       0.496
ACV05624.1
Predicted flavoprotein involved in K+ transport.
 
     0.406
Your Current Organism:
Kytococcus sedentarius
NCBI taxonomy Id: 478801
Other names: K. sedentarius DSM 20547, Kytococcus sedentarius DSM 20547, Kytococcus sedentarius str. DSM 20547, Kytococcus sedentarius strain DSM 20547
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.