STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV05706.1PFAM: TrwC relaxase; TIGRFAM: conjugative relaxase domain, TrwC/TraI family. (1184 aa)    
Predicted Functional Partners:
ACV05723.1
PFAM: ParB-like nuclease domain.
 
  
 0.818
ACV05720.1
DNA primase/polymerase-like protein; PFAM: Bifunctional DNA primase/polymerase, N-terminal; Primase C terminal 1 (PriCT-1).
 
   
 0.810
ACV05719.1
PFAM: Domain of unknown function (DUF955).
 
     0.807
ACV05741.1
Hypothetical protein.
 
   
 0.806
ACV05739.1
Hypothetical protein.
 
   
 0.799
ACV05721.1
Hypothetical protein.
 
     0.796
ACV06915.1
DNA/RNA helicase, superfamily I; PFAM: HRDC domain; UvrD/REP helicase.
  
 
 0.795
ACV05725.1
Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23.
 
     0.792
ACV05736.1
Hypothetical protein.
  
    0.778
ACV05735.1
Hypothetical protein.
  
     0.773
Your Current Organism:
Kytococcus sedentarius
NCBI taxonomy Id: 478801
Other names: K. sedentarius DSM 20547, Kytococcus sedentarius DSM 20547, Kytococcus sedentarius str. DSM 20547, Kytococcus sedentarius strain DSM 20547
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.