STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV05752.1Superfamily II RNA helicase; PFAM: DEAD/DEAH box helicase; Helicase conserved C-terminal domain. (891 aa)    
Predicted Functional Partners:
ACV05753.1
Hypothetical protein.
       0.786
ACV06689.1
ATP-dependent helicase HrpA; PFAM: Domain of unknown function (DUF1605); Helicase associated domain (HA2); Helicase conserved C-terminal domain; TIGRFAM: ATP-dependent helicase HrpA.
 
     0.582
ACV05750.1
Purine-cytosine permease-like transporter; PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; Belongs to the purine-cytosine permease (2.A.39) family.
       0.559
ACV05751.1
Nicotinamidase-like amidase; PFAM: Isochorismatase family.
       0.559
ACV05746.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
       0.538
ACV05747.1
Hypothetical protein.
       0.538
ACV05748.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
       0.538
ACV05749.1
Hypothetical protein.
       0.538
ACV05745.1
ATP-dependent DNA helicase RecQ; PFAM: DEAD/DEAH box helicase; Helicase conserved C-terminal domain; TIGRFAM: ATP-dependent DNA helicase, RecQ family.
     
 0.448
ACV06584.1
PFAM: HRDC domain; 3'-5' exonuclease; TIGRFAM: ribonuclease D.
  
     0.444
Your Current Organism:
Kytococcus sedentarius
NCBI taxonomy Id: 478801
Other names: K. sedentarius DSM 20547, Kytococcus sedentarius DSM 20547, Kytococcus sedentarius str. DSM 20547, Kytococcus sedentarius strain DSM 20547
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.