STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV06421.1Zn-dependent protease; PFAM: Peptidase family M50. (379 aa)    
Predicted Functional Partners:
ACV06422.1
tRNA (adenine-58-N(1)-) methyltransferase; PFAM: Methyltransferase domain.
      0.903
ACV06420.1
RecB family exonuclease.
  
    0.641
ACV06414.1
Hypothetical protein.
  
     0.580
ACV06419.1
ADP-ribose pyrophosphatase; PFAM: NUDIX domain.
       0.555
ACV06602.1
Hypothetical protein.
  
     0.540
ACV06360.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.
 
    0.473
ACV06603.1
acyl-CoA synthetase (NDP forming); PFAM: CoA binding domain; Acetyltransferase (GNAT) family.
 
     0.448
ACV06418.1
PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
 
    0.435
ACV06918.1
Predicted aminoglycoside phosphotransferase; PFAM: Phosphotransferase enzyme family.
  
     0.435
ACV06986.1
P-type ATPase, translocating; PFAM: E1-E2 ATPase; Cation transporter/ATPase, N-terminus; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; plasma-membrane calcium-translocating P-type ATPase.
 
    0.404
Your Current Organism:
Kytococcus sedentarius
NCBI taxonomy Id: 478801
Other names: K. sedentarius DSM 20547, Kytococcus sedentarius DSM 20547, Kytococcus sedentarius str. DSM 20547, Kytococcus sedentarius strain DSM 20547
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