STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV06566.1Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; PFAM: Aminotransferase class IV. (313 aa)    
Predicted Functional Partners:
ACV05514.1
PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
 
 
 0.926
ACV05665.1
PFAM: Aminotransferase class I and II.
  
 
 0.908
ACV06035.1
PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II.
     
 0.901
ACV06506.1
PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain.
  
 
 0.866
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
  
 
 0.839
ACV06565.1
PFAM: Putative transmembrane protein (PGPGW); TIGRFAM: conserved hypothetical protein TIGR02611.
  
    0.797
ACV07289.1
Chorismate mutase, clade 2; PFAM: ACT domain; Prephenate dehydratase; Chorismate mutase type II; Prephenate dehydrogenase; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2.
  
  
 0.703
ACV07145.1
hydroxymethylglutaryl-CoA lyase; PFAM: HMGL-like.
  
 
 0.698
ACV06567.1
Hypothetical protein.
  
  
 0.598
ACV07440.1
Dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
  
  
 0.513
Your Current Organism:
Kytococcus sedentarius
NCBI taxonomy Id: 478801
Other names: K. sedentarius DSM 20547, Kytococcus sedentarius DSM 20547, Kytococcus sedentarius str. DSM 20547, Kytococcus sedentarius strain DSM 20547
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