STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV07115.1PFAM: Bacterial regulatory proteins, tetR family. (251 aa)    
Predicted Functional Partners:
ACV07116.1
PFAM: Acyl-CoA oxidase; Acyl-CoA dehydrogenase, N-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, C-terminal domain.
   
 0.957
ACV07112.1
Acyl dehydratase; PFAM: MaoC like domain.
 
     0.870
ACV07113.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase.
 
     0.833
ACV07114.1
PFAM: Thiolase, N-terminal domain; Thiolase, C-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.825
ACV05905.1
TIGRFAM: conserved hypothetical protein TIGR03089.
  
     0.578
ACV05928.1
PFAM: Protein of unknown function (DUF2505).
  
     0.516
ACV06623.1
Hypothetical protein.
  
    0.472
ACV05925.1
PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB.
  
     0.463
ACV06348.1
PFAM: Glucose-6-phosphate dehydrogenase subunit; TIGRFAM: opcA protein.
  
     0.451
ACV06178.1
Predicted acyltransferase; PFAM: Acetyltransferase (GNAT) family.
  
    0.438
Your Current Organism:
Kytococcus sedentarius
NCBI taxonomy Id: 478801
Other names: K. sedentarius DSM 20547, Kytococcus sedentarius DSM 20547, Kytococcus sedentarius str. DSM 20547, Kytococcus sedentarius strain DSM 20547
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