STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV07486.1Helicase family protein with metal-binding cysteine cluster; PFAM: DEAD/DEAH box helicase; Helicase conserved C-terminal domain; Domain of unknown function (DUF1998). (780 aa)    
Predicted Functional Partners:
ACV07487.1
Hypothetical protein.
       0.691
ACV07484.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
  
    0.516
ACV07485.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter; TIGRFAM: ABC-2 type transporter, NodJ family.
  
    0.516
ACV07483.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter; TIGRFAM: ATP-binding ABC transporter family nodulation protein NodI.
       0.515
ACV06145.1
RNA-binding protein (KH domain); Belongs to the UPF0109 family.
  
   
 0.450
ACV07482.1
Hypothetical protein.
       0.423
Your Current Organism:
Kytococcus sedentarius
NCBI taxonomy Id: 478801
Other names: K. sedentarius DSM 20547, Kytococcus sedentarius DSM 20547, Kytococcus sedentarius str. DSM 20547, Kytococcus sedentarius strain DSM 20547
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.