STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV07488.1Hypothetical protein. (153 aa)    
Predicted Functional Partners:
ACV07489.1
PFAM: TadE-like protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
       0.758
ACV07490.1
Hypothetical protein.
       0.705
ACV07492.1
Flp pilus assembly protein TadB; PFAM: Bacterial type II secretion system protein F domain.
     
 0.645
ACV07494.1
Hypothetical protein.
       0.634
ACV07493.1
Flp pilus assembly protein, ATPase CpaF; PFAM: Type II/IV secretion system protein.
     
 0.628
ACV07491.1
Flp pilus assembly protein TadC; PFAM: Bacterial type II secretion system protein F domain.
       0.562
Your Current Organism:
Kytococcus sedentarius
NCBI taxonomy Id: 478801
Other names: K. sedentarius DSM 20547, Kytococcus sedentarius DSM 20547, Kytococcus sedentarius str. DSM 20547, Kytococcus sedentarius strain DSM 20547
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.