STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_6570Serine/threonine-protein kinase RIO2. (449 aa)    
Predicted Functional Partners:
AV274_2428
Uncharacterized protein.
   
 0.998
AV274_0731
Pre-rRNA-processing protein TSR1.
   
 0.995
AV274_2753
RNA-binding protein PNO1-like protein.
   
 0.994
AV274_2395
Bystin.
   
 0.993
AV274_2634
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.992
AV274_3045
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.987
AV274_1309
40S ribosomal protein S19e.
    
 0.986
AV274_0674
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
  
 0.985
AV274_0580
RNA-binding protein NOB1; Belongs to the NOB1 family.
   
 0.985
AV274_0511
RNA-binding protein nob1.
   
 0.985
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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