Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AV274_0286 | AV274_0552 | A0A196SLM2 | A0A196SKZ8 | G1/S-specific cyclin-E1; Belongs to the cyclin family. | Cyclin-dependent kinase Cdc2 family; Belongs to the protein kinase superfamily. | 0.973 |
AV274_0286 | AV274_1043 | A0A196SLM2 | A0A196SJM1 | G1/S-specific cyclin-E1; Belongs to the cyclin family. | Cell division related protein kinase 2; Belongs to the protein kinase superfamily. | 0.973 |
AV274_0286 | AV274_1679 | A0A196SLM2 | A0A196SL05 | G1/S-specific cyclin-E1; Belongs to the cyclin family. | Transcription factor Dp. | 0.838 |
AV274_0286 | AV274_3711 | A0A196SLM2 | A0A196SC04 | G1/S-specific cyclin-E1; Belongs to the cyclin family. | Cyclin-dependent-like kinase 5; Belongs to the protein kinase superfamily. | 0.973 |
AV274_0286 | AV274_3778 | A0A196SLM2 | A0A196SBP3 | G1/S-specific cyclin-E1; Belongs to the cyclin family. | Cyclin N-terminal domain-containing protein. | 0.904 |
AV274_0286 | AV274_6111 | A0A196SLM2 | A0A196S791 | G1/S-specific cyclin-E1; Belongs to the cyclin family. | E2F_TDP domain-containing protein. | 0.838 |
AV274_0286 | AV274_6537 | A0A196SLM2 | A0A196S3Q1 | G1/S-specific cyclin-E1; Belongs to the cyclin family. | RB_A domain-containing protein. | 0.990 |
AV274_0552 | AV274_0286 | A0A196SKZ8 | A0A196SLM2 | Cyclin-dependent kinase Cdc2 family; Belongs to the protein kinase superfamily. | G1/S-specific cyclin-E1; Belongs to the cyclin family. | 0.973 |
AV274_0552 | AV274_1679 | A0A196SKZ8 | A0A196SL05 | Cyclin-dependent kinase Cdc2 family; Belongs to the protein kinase superfamily. | Transcription factor Dp. | 0.777 |
AV274_0552 | AV274_3778 | A0A196SKZ8 | A0A196SBP3 | Cyclin-dependent kinase Cdc2 family; Belongs to the protein kinase superfamily. | Cyclin N-terminal domain-containing protein. | 0.975 |
AV274_0552 | AV274_6111 | A0A196SKZ8 | A0A196S791 | Cyclin-dependent kinase Cdc2 family; Belongs to the protein kinase superfamily. | E2F_TDP domain-containing protein. | 0.777 |
AV274_0552 | AV274_6537 | A0A196SKZ8 | A0A196S3Q1 | Cyclin-dependent kinase Cdc2 family; Belongs to the protein kinase superfamily. | RB_A domain-containing protein. | 0.969 |
AV274_0954 | AV274_1679 | A0A196SJV0 | A0A196SL05 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Transcription factor Dp. | 0.701 |
AV274_0954 | AV274_3778 | A0A196SJV0 | A0A196SBP3 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | Cyclin N-terminal domain-containing protein. | 0.838 |
AV274_0954 | AV274_6111 | A0A196SJV0 | A0A196S791 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | E2F_TDP domain-containing protein. | 0.701 |
AV274_0954 | AV274_6537 | A0A196SJV0 | A0A196S3Q1 | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | RB_A domain-containing protein. | 0.962 |
AV274_1043 | AV274_0286 | A0A196SJM1 | A0A196SLM2 | Cell division related protein kinase 2; Belongs to the protein kinase superfamily. | G1/S-specific cyclin-E1; Belongs to the cyclin family. | 0.973 |
AV274_1043 | AV274_1679 | A0A196SJM1 | A0A196SL05 | Cell division related protein kinase 2; Belongs to the protein kinase superfamily. | Transcription factor Dp. | 0.777 |
AV274_1043 | AV274_3778 | A0A196SJM1 | A0A196SBP3 | Cell division related protein kinase 2; Belongs to the protein kinase superfamily. | Cyclin N-terminal domain-containing protein. | 0.975 |
AV274_1043 | AV274_6111 | A0A196SJM1 | A0A196S791 | Cell division related protein kinase 2; Belongs to the protein kinase superfamily. | E2F_TDP domain-containing protein. | 0.777 |
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