STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_6404zf-C2HC5 domain-containing protein. (366 aa)    
Predicted Functional Partners:
AV274_0253
C3H1-type domain-containing protein.
    
 
 0.983
AV274_2944
Activating signal cointegrator 1 complex subunit 3.
    
 
 0.893
AV274_1711
ATP-dependent DNA helicase MER3.
    
 
 0.893
AV274_1619
Anchor protein AKAP7.
    
 
 0.885
AV274_1509
RL9, ribosomal protein 9.
    
   0.815
AV274_2292
Ribosomal protein 9.
    
   0.815
AV274_1508
60S ribosomal protein L9.
    
   0.815
AV274_1159
RL9, ribosomal protein 9.
    
   0.815
AV274_1511
Ribosomal protein L9.
    
   0.815
AV274_5872
U5 small nuclear ribonucleoprotein helicase.
    
 
 0.777
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.