STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_6372DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1259 aa)    
Predicted Functional Partners:
AV274_3542
MLH1, DNA mismatch repair protein.
 
 0.999
AV274_2765
Msh1 like, DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.995
AV274_1065
MSH5, Meiotic recombination protein.
  
0.995
AV274_1025
Msh2, mismatch repair ATPase.
  
0.995
AV274_0755
PMS1, ATP-binding protein.
 
 0.993
AV274_4353
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.992
AV274_4923
Proliferating cell nuclear antigen.
  
 0.992
AV274_2907
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.992
AV274_3169
MLH3 DNA mismatch repair protein.
 
 0.990
AV274_4960
ATP-dependent DNA helicase MPH1.
   
 
 0.978
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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