STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_5695RanBD1 domain-containing protein. (231 aa)    
Predicted Functional Partners:
AV274_5853
Nsp1p.
   
 0.998
AV274_5198
Nsp1p.
   
 0.998
AV274_4390
Nsp1p.
   
 0.998
AV274_6132
Uncharacterized protein.
   
 0.993
AV274_5601
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.985
AV274_4472
RRM Nup35-type domain-containing protein.
   
 0.961
AV274_6514
Nuclear pore complex protein Nup155.
   
 
 0.952
AV274_5190
WD domain-containing protein.
   
 0.944
AV274_1002
Nucleoporin-like protein; Belongs to the WD repeat SEC13 family.
   
 
 0.944
AV274_0275
Importin subunit beta-1.
    
 0.936
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.