STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_5530Syntaxin 6; Belongs to the syntaxin family. (607 aa)    
Predicted Functional Partners:
AV274_0067
Syntaxin-7-like protein.
    
 0.984
AV274_3714
Alpha-soluble NSF attachment protein 2.
    
 0.976
AV274_1115
Syntaxin-like protein.
    
 0.970
AV274_5815
Synaptobrevin-like protein; Belongs to the synaptobrevin family.
    
 0.969
AV274_1722
V-SNARE domain-containing protein.
   
 0.956
AV274_0883
Vesicle transport V-snare 13.
   
 0.956
AV274_5860
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
    
 0.926
AV274_4236
Syntaxin-like protein; Belongs to the syntaxin family.
    
 0.923
AV274_4776
Vacuolar protein sorting-associated protein.
    
 0.904
AV274_4714
Fat-free family protein.
    
 0.904
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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