STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_5533Fe-S cluster biosynthesis protein. (483 aa)    
Predicted Functional Partners:
AV274_5155
Glutamine synthetase; Belongs to the glutamine synthetase family.
  
 
 0.867
AV274_1483
Hydrogenase with flavodoxin domain.
   
 0.865
AV274_1689
Cytosolic Fe-S cluster assembly factor; Belongs to the NARF family.
   
 0.865
AV274_4252
NADH dehydrogenase flavoprotein 2.
    
 0.820
sufCB
SufB/sufD domain protein.
    
 0.815
AV274_0947
N2227 domain-containing protein.
     
 0.809
AV274_1191
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.808
AV274_6412
NADH dehydrogenase iron-sulfur protein 8.
  
 
 0.804
AV274_3012
NADH dehydrogenase iron-sulfur protein 8.
  
 
 0.804
AV274_5814
Complex I assembly factor, MidA.
     
 0.781
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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