STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_5990Prestin. (547 aa)    
Predicted Functional Partners:
AV274_5172
MRE11, DNA repair exonuclease.
  
 
 0.957
AV274_0373
Rab1B.
   
 
 0.955
AV274_0066
Rbel1.
   
 
 0.955
AV274_4074
Retroelement.
    
 
 0.913
AV274_3276
Retroelement.
    
 
 0.913
AV274_2915
Retroelement.
    
 
 0.913
AV274_5155
Glutamine synthetase; Belongs to the glutamine synthetase family.
   
 
 0.894
AV274_4887
Sodium-driven chloride bicarbonate exchanger.
     
 0.885
AV274_4245
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 
 0.875
AV274_2091
Ankyrin repeat family protein.
  
 
 0.867
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.