Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AV274_0191 | AV274_2663 | A0A196SLW1 | A0A196SI08 | Ribosomal protein L21. | 50S ribosomal protein L15. | 0.999 |
AV274_0191 | AV274_3313 | A0A196SLW1 | A0A196SF66 | Ribosomal protein L21. | 50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. | 0.999 |
AV274_0191 | AV274_4818 | A0A196SLW1 | A0A196SAZ9 | Ribosomal protein L21. | Pseudouridine synthase family protein. | 0.990 |
AV274_0191 | AV274_5579 | A0A196SLW1 | A0A196S8S3 | Ribosomal protein L21. | GTP-binding protein. | 0.890 |
AV274_0191 | AV274_5826 | A0A196SLW1 | A0A196S7X7 | Ribosomal protein L21. | Mitochondrial GTPase 1. | 0.992 |
AV274_0259 | AV274_5579 | A0A196SP81 | A0A196S8S3 | Uncharacterized protein. | GTP-binding protein. | 0.948 |
AV274_1528 | AV274_5579 | A0A196SKL9 | A0A196S8S3 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA. | GTP-binding protein. | 0.959 |
AV274_1591 | AV274_5579 | A0A196SL98 | A0A196S8S3 | Endoplasmic reticulum vesicle transporter protein. | GTP-binding protein. | 0.948 |
AV274_2663 | AV274_0191 | A0A196SI08 | A0A196SLW1 | 50S ribosomal protein L15. | Ribosomal protein L21. | 0.999 |
AV274_2663 | AV274_3313 | A0A196SI08 | A0A196SF66 | 50S ribosomal protein L15. | 50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. | 0.999 |
AV274_2663 | AV274_4818 | A0A196SI08 | A0A196SAZ9 | 50S ribosomal protein L15. | Pseudouridine synthase family protein. | 0.974 |
AV274_2663 | AV274_5579 | A0A196SI08 | A0A196S8S3 | 50S ribosomal protein L15. | GTP-binding protein. | 0.920 |
AV274_2663 | AV274_5826 | A0A196SI08 | A0A196S7X7 | 50S ribosomal protein L15. | Mitochondrial GTPase 1. | 0.987 |
AV274_3313 | AV274_0191 | A0A196SF66 | A0A196SLW1 | 50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. | Ribosomal protein L21. | 0.999 |
AV274_3313 | AV274_2663 | A0A196SF66 | A0A196SI08 | 50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. | 50S ribosomal protein L15. | 0.999 |
AV274_3313 | AV274_4818 | A0A196SF66 | A0A196SAZ9 | 50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. | Pseudouridine synthase family protein. | 0.970 |
AV274_3313 | AV274_5579 | A0A196SF66 | A0A196S8S3 | 50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. | GTP-binding protein. | 0.915 |
AV274_3313 | AV274_5826 | A0A196SF66 | A0A196S7X7 | 50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. | Mitochondrial GTPase 1. | 0.993 |
AV274_4818 | AV274_0191 | A0A196SAZ9 | A0A196SLW1 | Pseudouridine synthase family protein. | Ribosomal protein L21. | 0.990 |
AV274_4818 | AV274_2663 | A0A196SAZ9 | A0A196SI08 | Pseudouridine synthase family protein. | 50S ribosomal protein L15. | 0.974 |
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