STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_5053Proteinaceous RNase P. (456 aa)    
Predicted Functional Partners:
AV274_4744
3-hydroxyacyl-CoA dehydrogenase.
    
 0.946
AV274_5187
RNA (Guanine-9-)-methyltransferase domain-containing protein.
   
 0.866
AV274_0598
tRNA m(1)G methyltransferase.
   
 0.866
AV274_0209
tRNA (Guanine-N(1)-)-methyltransferase.
   
 0.866
AV274_0355
TATA-box-binding protein.
   
  
 0.801
AV274_4510
NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6-like protein.
  
 
 0.796
AV274_5949
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.736
AV274_0286
G1/S-specific cyclin-E1; Belongs to the cyclin family.
   
  
 0.695
AV274_6369
RNA binding protein.
  
    0.667
AV274_6517
Rpl5.
     
 0.644
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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