STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_5264Phosphatidylinositol transporter. (384 aa)    
Predicted Functional Partners:
AV274_4186
Rac2 protein.
    
 0.703
AV274_4721
Rho family GTPase.
    
 0.703
AV274_3316
Rac GTPase protein.
    
 0.703
AV274_5296
Short chain dehydrogenase.
    
 0.675
AV274_3724
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.675
AV274_5745
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.674
AV274_6467
Dehydrogenase/reductase SDR family member 12.
    
 0.660
AV274_6492
Dehydrogenase/reductase SDR family member.
    
 0.660
AV274_0028
Glycosyl transferase family 1 protein.
    
 0.660
AV274_6491
Adaptor protein complex 4, subunit epsilon 1.
    
 0.654
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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