STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_4956Anaphase promoting complex 11 (Apc11/Cdc27). (100 aa)    
Predicted Functional Partners:
AV274_4596
Myosin heavy chain kinase.
    
 0.998
AV274_5031
Uncharacterized protein.
    
 0.997
AV274_2244
Cullin; Belongs to the cullin family.
    
 0.997
AV274_2763
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.997
AV274_1757
DNA damage-binding protein.
    
 0.996
AV274_4090
Cullin_Nedd8 domain-containing protein.
    
 0.987
AV274_0996
Anaphase-promoting complex subunit 2; Belongs to the cullin family.
    
 0.987
AV274_1011
Cullin family-like protein.
    
 0.987
AV274_0798
DNA excision repair protein ERCC-8.
    
 0.977
AV274_4655
S-phase kinase-associated protein 1A; Belongs to the SKP1 family.
   
 0.972
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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