STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_4195Programmed cell death protein 2. (331 aa)    
Predicted Functional Partners:
AV274_2817
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.821
AV274_0768
RS2, ribosomal protein 2.
    
 
 0.821
AV274_2234
30S ribosomal protein S5.
    
 
 0.702
AV274_6321
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
 
 0.666
AV274_2602
Cell division cycle 2 CDC20, cofactor of APC complex.
   
 
 0.660
AV274_2829
BCCIP family protein; Belongs to the BCP1 family.
   
  
 0.454
AV274_5055
Methyltransferase.
   
 
 0.449
AV274_2428
Uncharacterized protein.
   
  
 0.418
AV274_2395
Bystin.
   
  
 0.404
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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