STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_3893Zinc finger CCCH domain-containing protein. (407 aa)    
Predicted Functional Partners:
AV274_5112
OBG-type G domain-containing protein.
   
 
 0.983
AV274_4532
OBG-type G domain-containing protein.
   
 
 0.983
AV274_3022
GTPase.
   
 
 0.968
AV274_0674
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
   0.943
AV274_1309
40S ribosomal protein S19e.
   
   0.857
AV274_5084
Ribosomal protein 23a 60S large ribosomal subunit; Belongs to the universal ribosomal protein uL23 family.
   
   0.851
AV274_1214
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
   0.851
AV274_4391
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
   0.843
AV274_3855
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
   0.843
AV274_2817
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
   0.843
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.