STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_4607Uncharacterized protein. (489 aa)    
Predicted Functional Partners:
AV274_0412
ETL-llike protein.
    
 0.996
AV274_1674
HIT-type domain-containing protein.
    
 
 0.991
AV274_3423
RuvB-like helicase.
    
 0.987
AV274_2174
RuvB-like helicase.
    
 0.987
AV274_1663
SANT_DAMP1_like domain-containing protein.
    
 0.987
AV274_0463
DNA methyltransferase 1-associated protein.
    
 0.987
AV274_1714
Actin-related protein 4.
    
 0.983
AV274_5490
Histone H2A; Belongs to the histone H2A family.
    
 
 0.970
AV274_4046
Histone H2A; Belongs to the histone H2A family.
    
 
 0.970
AV274_5073
RuvB-like helicase.
    
 0.965
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.