STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_3604Mitochondrial folate transporter; Belongs to the mitochondrial carrier (TC 2.A.29) family. (285 aa)    
Predicted Functional Partners:
AV274_1481
Riboflavin kinase.
   
  
 0.566
AV274_4651
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
      
 0.539
AV274_1920
Phosphoribosylamine-glycine ligase.
      
 0.539
AV274_4495
Mitochondrial carrier (BOU / S-adenosylmethionine carrier); Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
0.502
AV274_3182
BolA domain protein; Belongs to the BolA/IbaG family.
      
 0.497
AV274_4847
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
   
  
 0.432
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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