STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_3397Eukaryotic translation initiation factor SUI1 family protein. (588 aa)    
Predicted Functional Partners:
AV274_6019
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 
 0.833
AV274_1309
40S ribosomal protein S19e.
   
   0.833
AV274_5603
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.823
AV274_1647
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.823
AV274_2817
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.820
AV274_0768
RS2, ribosomal protein 2.
    
 
 0.820
AV274_6280
Ribosomal protein subunit S3.
    
 
 0.819
AV274_4524
Ribosomal protein subunit S3.
    
 
 0.819
AV274_0674
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
   0.819
AV274_0444
Ribosomal protein subunit S3.
    
 
 0.819
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.