STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_3407ADP-ribosylation factor GTPase-activating protein. (378 aa)    
Predicted Functional Partners:
AV274_5672
ADP-ribosylation factor GTPase-activating protein AGD8.
  
0.969
AV274_5959
ADP-ribosylation factor GTPase-activating protein AGD5.
    
0.916
AV274_3095
ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
   
 0.897
AV274_3096
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
   
 0.897
AV274_2877
Arf2; Belongs to the small GTPase superfamily. Arf family.
   
 0.897
AV274_1911
ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
   
 0.897
AV274_1787
ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
   
 0.897
AV274_5451
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.853
AV274_4746
Epsilon coatomer.
   
 0.850
AV274_4021
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.839
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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