STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_3342Ubiquitin carboxyl-terminal hydrolase. (860 aa)    
Predicted Functional Partners:
AV274_2608
Phosphatidylinositol kinase (PIK-F).
    
 0.843
AV274_2100
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.757
AV274_3864
USP domain-containing protein; Belongs to the peptidase C19 family.
    
0.755
AV274_3313
50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.753
AV274_0191
Ribosomal protein L21.
   
 
 0.743
AV274_3526
Uncharacterized protein.
    
 
 0.740
AV274_1103
LSU ribosomal protein L4P.
   
 
 0.733
AV274_2266
RING finger and SPRY domain-containing protein.
   
 0.720
AV274_4353
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.712
AV274_4923
Proliferating cell nuclear antigen.
   
  0.712
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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