STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_4194RabX3. (257 aa)    
Predicted Functional Partners:
AV274_2769
Calmodulin-binding protein.
    
 0.999
AV274_2019
Uncharacterized protein.
   
 0.999
AV274_3492
Intersectin.
    
 0.988
AV274_3390
Calmodulin-binding protein.
    
 0.988
AV274_2091
Ankyrin repeat family protein.
  
 0.921
AV274_0340
Ankyrin repeat family protein.
  
 0.921
AV274_4697
Complement receptor type 2.
    
 0.907
AV274_3231
Uncharacterized protein.
    
 0.907
AV274_5059
Phosphatidylinositol kinase; Belongs to the PI3/PI4-kinase family.
    
 0.905
AV274_3101
Protein kinase domain-containing protein.
    
 0.898
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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