Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AV274_0352 | AV274_0521 | A0A196SNV3 | A0A196SNB9 | RNA polymerase-associated protein CTR9. | RNA polymerase II core subunit. | 0.995 |
AV274_0352 | AV274_1447 | A0A196SNV3 | A0A196SIF8 | RNA polymerase-associated protein CTR9. | Transcription elongation factor SPT4. | 0.990 |
AV274_0352 | AV274_2300 | A0A196SNV3 | A0A196SJ67 | RNA polymerase-associated protein CTR9. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.990 |
AV274_0352 | AV274_3455 | A0A196SNV3 | A0A196SF31 | RNA polymerase-associated protein CTR9. | Plus3 domain-containing protein. | 0.999 |
AV274_0352 | AV274_3931 | A0A196SNV3 | A0A196SDF5 | RNA polymerase-associated protein CTR9. | DNA-directed RNA polymerase II subunit RPB7. | 0.986 |
AV274_0352 | AV274_4015 | A0A196SNV3 | A0A196SDC4 | RNA polymerase-associated protein CTR9. | FACT complex subunit SPT16. | 0.999 |
AV274_0352 | AV274_4211 | A0A196SNV3 | A0A196SAU4 | RNA polymerase-associated protein CTR9. | Uncharacterized protein. | 0.978 |
AV274_0352 | AV274_4240 | A0A196SNV3 | A0A196SD57 | RNA polymerase-associated protein CTR9. | Transcription elongation factor SPT6. | 0.992 |
AV274_0352 | AV274_4517 | A0A196SNV3 | A0A196SCJ1 | RNA polymerase-associated protein CTR9. | RNA pol II accessory factor CDC73-like protein. | 0.999 |
AV274_0352 | AV274_5475 | A0A196SNV3 | A0A196S6Z4 | RNA polymerase-associated protein CTR9. | Transcription elongation factor SPT5. | 0.995 |
AV274_0521 | AV274_0352 | A0A196SNB9 | A0A196SNV3 | RNA polymerase II core subunit. | RNA polymerase-associated protein CTR9. | 0.995 |
AV274_0521 | AV274_1447 | A0A196SNB9 | A0A196SIF8 | RNA polymerase II core subunit. | Transcription elongation factor SPT4. | 0.999 |
AV274_0521 | AV274_2300 | A0A196SNB9 | A0A196SJ67 | RNA polymerase II core subunit. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
AV274_0521 | AV274_3455 | A0A196SNB9 | A0A196SF31 | RNA polymerase II core subunit. | Plus3 domain-containing protein. | 0.992 |
AV274_0521 | AV274_3931 | A0A196SNB9 | A0A196SDF5 | RNA polymerase II core subunit. | DNA-directed RNA polymerase II subunit RPB7. | 0.999 |
AV274_0521 | AV274_4015 | A0A196SNB9 | A0A196SDC4 | RNA polymerase II core subunit. | FACT complex subunit SPT16. | 0.998 |
AV274_0521 | AV274_4211 | A0A196SNB9 | A0A196SAU4 | RNA polymerase II core subunit. | Uncharacterized protein. | 0.982 |
AV274_0521 | AV274_4240 | A0A196SNB9 | A0A196SD57 | RNA polymerase II core subunit. | Transcription elongation factor SPT6. | 0.997 |
AV274_0521 | AV274_4517 | A0A196SNB9 | A0A196SCJ1 | RNA polymerase II core subunit. | RNA pol II accessory factor CDC73-like protein. | 0.993 |
AV274_0521 | AV274_5475 | A0A196SNB9 | A0A196S6Z4 | RNA polymerase II core subunit. | Transcription elongation factor SPT5. | 0.999 |
page 1 of 6