STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_3941Deoxynucleoside triphosphate triphosphohydrolase. (480 aa)    
Predicted Functional Partners:
AV274_4577
Cyclin a2.
    
 
 0.605
AV274_3204
Cyclin-J; Belongs to the cyclin family.
    
 
 0.605
AV274_2244
Cullin; Belongs to the cullin family.
    
 
 0.585
AV274_1757
DNA damage-binding protein.
    
 
 0.566
AV274_3860
HECT E3 ubiquitin ligase.
    
 
 0.546
AV274_1062
tRNA-specific adenosine deaminase 1-like protein.
   
 
 0.528
AV274_1847
Uncharacterized protein.
   
 
 0.495
AV274_3143
Exonuclease family protein.
    
 0.438
AV274_0639
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
     
 0.430
AV274_3764
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
     
 0.416
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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