STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_3126Uncharacterized protein. (1008 aa)    
Predicted Functional Partners:
AV274_2769
Calmodulin-binding protein.
    
 0.986
AV274_1135
Ubiquitin carboxyl-terminal hydrolase.
    
 0.955
AV274_5738
MYB DNA binding protein/ transcription factor-like protein.
    
 0.954
AV274_5054
Integrin beta-4.
    
 0.954
AV274_3856
Histone acetyltransferase.
    
 0.944
AV274_6406
Transcription initiation factor TFIID subunit D5.
    
 0.924
AV274_0683
TATA Binding Protein Associated Factor 10.
    
 0.918
AV274_4280
Transformation/transcription domain-associated protein.
    
 0.904
AV274_0968
Transformation/transcription domain-associated protein.
    
 0.904
AV274_1068
Phosphatidylinositol kinase (PIK-L3).
    
 0.904
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.