STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_4145Ribonucleoside triphosphate reductase. (536 aa)    
Predicted Functional Partners:
AV274_5992
Thymidylate Kinase.
   
 
 0.720
AV274_1920
Phosphoribosylamine-glycine ligase.
     
 0.702
AV274_6396
dUTP pyrophosphatase.
  
 
 0.682
AV274_2524
Mitochondrial coenzyme A transporter; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
 
 0.682
AV274_3444
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase.
     
 0.680
AV274_4853
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
 0.672
AV274_1648
GTP cyclohydrolase I.
    
  0.670
AV274_1029
Transketolase.
    
  0.670
AV274_4353
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.655
AV274_4923
Proliferating cell nuclear antigen.
    
 0.655
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.