STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_2928Peptidase. (454 aa)    
Predicted Functional Partners:
AV274_4335
26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.
   
   0.825
AV274_2116
26S proteasome regulatory subunit.
    
   0.825
AV274_2841
26S proteasome non-ATPase regulatory subunit 12.
   
   0.825
AV274_0881
26S protease regulatory subunit 6A-A; Belongs to the AAA ATPase family.
   
   0.825
AV274_6559
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
    
   0.823
AV274_6477
Proteasome endopeptidase complex.
    
   0.823
AV274_4783
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
    
   0.823
AV274_3023
Proteasome subunit alpha type.
    
   0.823
AV274_1828
26s protease regulatory subunit 4; Belongs to the AAA ATPase family.
    
   0.823
AV274_0852
AAA-type ATPase; Belongs to the AAA ATPase family.
    
   0.823
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.