STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_379240S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (170 aa)    
Predicted Functional Partners:
AV274_1309
40S ribosomal protein S19e.
   
 0.989
AV274_3045
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.988
AV274_0674
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.988
AV274_6019
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.986
AV274_3382
60S ribosomal protein L7a-2.
   
 0.986
AV274_5603
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.977
AV274_6074
40S ribosomal protein S10.
   
 0.977
AV274_4391
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.977
AV274_5046
40S ribosomal protein S10.
   
 0.977
AV274_3765
40S ribosomal protein S29.
   
 0.977
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.