Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AV274_0055 | AV274_0521 | A0A196SPX8 | A0A196SNB9 | DNA-directed RNA polymerase II subunit J. | RNA polymerase II core subunit. | 0.999 |
AV274_0055 | AV274_0691 | A0A196SPX8 | A0A196SMX0 | DNA-directed RNA polymerase II subunit J. | DNA-directed RNA polymerase I and III subunit RPAC1. | 0.989 |
AV274_0055 | AV274_2510 | A0A196SPX8 | A0A196SFF7 | DNA-directed RNA polymerase II subunit J. | Uncharacterized protein. | 0.989 |
AV274_0055 | AV274_2724 | A0A196SPX8 | A0A196SEX9 | DNA-directed RNA polymerase II subunit J. | Nuclear LIM factor interactor-interacting protein. | 0.825 |
AV274_0055 | AV274_3041 | A0A196SPX8 | A0A196SGI3 | DNA-directed RNA polymerase II subunit J. | RNA polymerase 3 subunit. | 0.989 |
AV274_0055 | AV274_3931 | A0A196SPX8 | A0A196SDF5 | DNA-directed RNA polymerase II subunit J. | DNA-directed RNA polymerase II subunit RPB7. | 0.999 |
AV274_0521 | AV274_0055 | A0A196SNB9 | A0A196SPX8 | RNA polymerase II core subunit. | DNA-directed RNA polymerase II subunit J. | 0.999 |
AV274_0521 | AV274_0691 | A0A196SNB9 | A0A196SMX0 | RNA polymerase II core subunit. | DNA-directed RNA polymerase I and III subunit RPAC1. | 0.828 |
AV274_0521 | AV274_2510 | A0A196SNB9 | A0A196SFF7 | RNA polymerase II core subunit. | Uncharacterized protein. | 0.992 |
AV274_0521 | AV274_2724 | A0A196SNB9 | A0A196SEX9 | RNA polymerase II core subunit. | Nuclear LIM factor interactor-interacting protein. | 0.824 |
AV274_0521 | AV274_3041 | A0A196SNB9 | A0A196SGI3 | RNA polymerase II core subunit. | RNA polymerase 3 subunit. | 0.829 |
AV274_0521 | AV274_3931 | A0A196SNB9 | A0A196SDF5 | RNA polymerase II core subunit. | DNA-directed RNA polymerase II subunit RPB7. | 0.999 |
AV274_0691 | AV274_0055 | A0A196SMX0 | A0A196SPX8 | DNA-directed RNA polymerase I and III subunit RPAC1. | DNA-directed RNA polymerase II subunit J. | 0.989 |
AV274_0691 | AV274_0521 | A0A196SMX0 | A0A196SNB9 | DNA-directed RNA polymerase I and III subunit RPAC1. | RNA polymerase II core subunit. | 0.828 |
AV274_0691 | AV274_2510 | A0A196SMX0 | A0A196SFF7 | DNA-directed RNA polymerase I and III subunit RPAC1. | Uncharacterized protein. | 0.991 |
AV274_0691 | AV274_2724 | A0A196SMX0 | A0A196SEX9 | DNA-directed RNA polymerase I and III subunit RPAC1. | Nuclear LIM factor interactor-interacting protein. | 0.824 |
AV274_0691 | AV274_3931 | A0A196SMX0 | A0A196SDF5 | DNA-directed RNA polymerase I and III subunit RPAC1. | DNA-directed RNA polymerase II subunit RPB7. | 0.989 |
AV274_1041 | AV274_2724 | A0A196SLS9 | A0A196SEX9 | Nuclear elongation and deformation protein 1. | Nuclear LIM factor interactor-interacting protein. | 0.880 |
AV274_1894 | AV274_2724 | A0A196SH61 | A0A196SEX9 | Tim17. | Nuclear LIM factor interactor-interacting protein. | 0.865 |
AV274_1894 | AV274_4129 | A0A196SH61 | A0A196SD18 | Tim17. | Tim23. | 0.999 |
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