STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_3420THO complex subunit. (926 aa)    
Predicted Functional Partners:
AV274_2622
WD40 domain-containing protein.
    
 0.999
AV274_6548
Myosin-A docking protein.
   
 0.991
AV274_5306
THO complex subunit 2.
   
 0.991
AV274_3641
RRM domain-containing protein.
    
 0.978
AV274_2400
Helicase at 25E.
   
 0.976
AV274_0341
DEAD/DEAH box RNA helicase.
   
 0.976
AV274_6287
Nuclear cap-binding protein subunit 2.
    
 0.889
AV274_3422
MIF4G_like domain-containing protein.
    
 0.868
AV274_5227
Uncharacterized protein.
     
 0.866
AV274_6182
Eukaryotic initiation factor 4A-III.
   
 0.835
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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