STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_3278Calcium/calmodulin-dependent protein kinase. (1113 aa)    
Predicted Functional Partners:
AV274_6558
Serine/threonine-protein phosphatase.
    
 0.856
AV274_4322
Serine/threonine-protein phosphatase.
    
 0.856
AV274_2706
Serine/threonine-protein phosphatase.
    
 0.856
AV274_1470
Serine/threonine-protein phosphatase.
    
 0.856
AV274_5325
Calmodulin.
   
 0.824
AV274_3907
Calmodulin.
   
 0.824
AV274_3377
Calmodulin.
   
 0.824
AV274_2086
Flagellar associated protein, calmodulin-like protein.
   
 0.824
AV274_2838
Calmodulin.
   
 0.824
AV274_0617
Magnesium and cobalt transport protein CorA.
   
 0.824
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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