STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_3060Serine/arginine-rich splicing factor 11-like protein. (523 aa)    
Predicted Functional Partners:
AV274_3335
Serine/arginine-rich splicing factor 2.
   
 0.922
AV274_5380
Serine/arginine repetitive matrix protein.
   
 0.864
AV274_0020
Poly(A) binding protein Pab2.
   
 0.859
AV274_1181
Uncharacterized protein.
   
 0.815
AV274_1365
RRM domain-containing protein.
   
 0.815
AV274_2300
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.807
AV274_0471
Heterogeneous nuclear ribonucleoprotein H2.
   
 0.799
AV274_6012
HA2 multi-domain protein.
    
  0.794
AV274_3816
U1 small nuclear ribonucleoprotein 70 kDa-like protein.
   
 0.791
AV274_4801
Pre-mRNA-splicing factor SLU7.
     
 0.788
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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