STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_3348Uncharacterized protein. (425 aa)    
Predicted Functional Partners:
AV274_4510
NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6-like protein.
   
 
 0.955
AV274_3656
dTDP-glucose 4,6-dehydratase.
   
 0.865
AV274_3487
GDP-L-fucose synthetase.
   
 0.865
AV274_3506
Threonine 3-dehydrogenase.
   
 0.865
AV274_0288
TDH, threonine 3-dehydrogenase.
   
 0.865
AV274_4259
Estradiol 17-beta-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.831
AV274_6512
NADH dehydrogenase 1 alpha subcomplex assembly factor.
    
 0.794
AV274_6365
tRNA methyltransferase.
    
 0.794
AV274_6472
Arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.794
AV274_6321
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.794
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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