STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_3260Uncharacterized protein. (120 aa)    
Predicted Functional Partners:
AV274_0888
Nitrogen permease regulator 2.
   
 0.968
AV274_5315
DEP domain containing protein.
    
 0.963
AV274_5137
Signal peptidase subunit.
   
 0.953
AV274_4433
Uncharacterized protein.
    
 0.946
AV274_0672
WD repeat-containing protein 24-like protein.
    
 0.946
AV274_1497
Nitrogen permease regulator 3-like protein.
   
 0.795
AV274_0403
Zinc_ribbon_16 domain-containing protein.
     
 0.774
AV274_0453
V-type h-atpase subunit.
    
 0.753
AV274_3873
Ubiquitin-like domain-containing protein.
     
 0.749
AV274_1002
Nucleoporin-like protein; Belongs to the WD repeat SEC13 family.
     
 0.747
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.