STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_3218Uncharacterized protein. (106 aa)    
Predicted Functional Partners:
AV274_5103
Armadillo repeat-containing protein 7.
    
 
 0.946
AV274_2097
PHD finger-like domain-containing protein 5A.
   
   0.940
AV274_6164
Splicing factor 3B subunit 2.
    
   0.938
AV274_2301
Zinc finger protein.
    
   0.938
AV274_6434
Uncharacterized protein.
   
   0.837
AV274_6505
Pre-mRNA-splicing factor ATP-dependent RNA helicase.
    
 
 0.835
AV274_0149
Pre-mRNA branch site protein p14.
   
   0.835
AV274_4376
Splicing factor 3B subunit 1.
    
   0.825
AV274_3065
Pre-mRNA-processing-splicing factor 8.
    
   0.825
AV274_1860
Pre-mRNA-processing-splicing factor 8.
    
   0.825
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.