STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_2884Histone H3. (135 aa)    
Predicted Functional Partners:
AV274_6397
Histone H2B; Belongs to the histone H2B family.
 
 
 0.957
AV274_6602
Histone H2B; Belongs to the histone H2B family.
 
 
 0.957
AV274_5439
Histone H2B; Belongs to the histone H2B family.
 
 
 0.957
AV274_2417
Histone H2B; Belongs to the histone H2B family.
 
 
 0.955
AV274_5261
F/Y-rich N-terminus family protein.
   
 0.950
AV274_0967
Chondroitin-glucuronate 5-epimerase.
 
 
 0.950
AV274_3856
Histone acetyltransferase.
    
 0.949
AV274_2054
Uncharacterized protein.
   
 0.949
AV274_2919
ANK_REP_REGION domain-containing protein.
   
 0.945
AV274_5111
Histone acetyltransferase type B catalytic subunit.
    
 0.944
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.