Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AV274_0012 | AV274_0302 | A0A196SMD4 | A0A196SQA7 | Chaperone protein DnaJ. | Lon protease homolog; Belongs to the peptidase S16 family. | 0.606 |
AV274_0012 | AV274_1133 | A0A196SMD4 | A0A196SLM5 | Chaperone protein DnaJ. | Heat shock protein. | 0.735 |
AV274_0012 | AV274_2005 | A0A196SMD4 | A0A196SJB2 | Chaperone protein DnaJ. | AAA ATPase domain-containing protein; Belongs to the ClpA/ClpB family. | 0.735 |
AV274_0012 | AV274_2879 | A0A196SMD4 | A0A196SHH2 | Chaperone protein DnaJ. | Heat shock protein; Belongs to the small heat shock protein (HSP20) family. | 0.423 |
AV274_0012 | AV274_3619 | A0A196SMD4 | A0A196SCH5 | Chaperone protein DnaJ. | AAA ATPase domain-containing protein. | 0.735 |
AV274_0012 | AV274_4462 | A0A196SMD4 | A0A196SCD8 | Chaperone protein DnaJ. | Nucleotide exchange factor SIL1. | 0.658 |
AV274_0012 | AV274_5424 | A0A196SMD4 | A0A196S956 | Chaperone protein DnaJ. | Hsp70. | 0.658 |
AV274_0012 | AV274_6246 | A0A196SMD4 | A0A196S6X3 | Chaperone protein DnaJ. | DNA-J/Hsp40. | 0.523 |
AV274_0012 | mge1 | A0A196SMD4 | I3WER8 | Chaperone protein DnaJ. | GrpE; Belongs to the GrpE family. | 0.894 |
AV274_0302 | AV274_0012 | A0A196SQA7 | A0A196SMD4 | Lon protease homolog; Belongs to the peptidase S16 family. | Chaperone protein DnaJ. | 0.606 |
AV274_0302 | AV274_1133 | A0A196SQA7 | A0A196SLM5 | Lon protease homolog; Belongs to the peptidase S16 family. | Heat shock protein. | 0.833 |
AV274_0302 | AV274_2005 | A0A196SQA7 | A0A196SJB2 | Lon protease homolog; Belongs to the peptidase S16 family. | AAA ATPase domain-containing protein; Belongs to the ClpA/ClpB family. | 0.833 |
AV274_0302 | AV274_2879 | A0A196SQA7 | A0A196SHH2 | Lon protease homolog; Belongs to the peptidase S16 family. | Heat shock protein; Belongs to the small heat shock protein (HSP20) family. | 0.455 |
AV274_0302 | AV274_3551 | A0A196SQA7 | A0A196SEU6 | Lon protease homolog; Belongs to the peptidase S16 family. | Chaperone protein dnaJ. | 0.606 |
AV274_0302 | AV274_3619 | A0A196SQA7 | A0A196SCH5 | Lon protease homolog; Belongs to the peptidase S16 family. | AAA ATPase domain-containing protein. | 0.833 |
AV274_0302 | AV274_6246 | A0A196SQA7 | A0A196S6X3 | Lon protease homolog; Belongs to the peptidase S16 family. | DNA-J/Hsp40. | 0.524 |
AV274_0302 | mge1 | A0A196SQA7 | I3WER8 | Lon protease homolog; Belongs to the peptidase S16 family. | GrpE; Belongs to the GrpE family. | 0.936 |
AV274_1133 | AV274_0012 | A0A196SLM5 | A0A196SMD4 | Heat shock protein. | Chaperone protein DnaJ. | 0.735 |
AV274_1133 | AV274_0302 | A0A196SLM5 | A0A196SQA7 | Heat shock protein. | Lon protease homolog; Belongs to the peptidase S16 family. | 0.833 |
AV274_1133 | AV274_2879 | A0A196SLM5 | A0A196SHH2 | Heat shock protein. | Heat shock protein; Belongs to the small heat shock protein (HSP20) family. | 0.686 |
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