Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AV274_0055 | AV274_0464 | A0A196SPX8 | A0A196SNL7 | DNA-directed RNA polymerase II subunit J. | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | 0.999 |
| AV274_0055 | AV274_0521 | A0A196SPX8 | A0A196SNB9 | DNA-directed RNA polymerase II subunit J. | RNA polymerase II core subunit. | 0.999 |
| AV274_0055 | AV274_0800 | A0A196SPX8 | A0A196SML5 | DNA-directed RNA polymerase II subunit J. | DNA-directed RNA polymerases I, II, and III subunit RPABC2-like protein. | 0.999 |
| AV274_0055 | AV274_1447 | A0A196SPX8 | A0A196SIF8 | DNA-directed RNA polymerase II subunit J. | Transcription elongation factor SPT4. | 0.999 |
| AV274_0055 | AV274_2300 | A0A196SPX8 | A0A196SJ67 | DNA-directed RNA polymerase II subunit J. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| AV274_0055 | AV274_2931 | A0A196SPX8 | A0A196SEB4 | DNA-directed RNA polymerase II subunit J. | Transcription elongation factor TFIIS.h. | 0.999 |
| AV274_0055 | AV274_3931 | A0A196SPX8 | A0A196SDF5 | DNA-directed RNA polymerase II subunit J. | DNA-directed RNA polymerase II subunit RPB7. | 0.999 |
| AV274_0055 | AV274_4015 | A0A196SPX8 | A0A196SDC4 | DNA-directed RNA polymerase II subunit J. | FACT complex subunit SPT16. | 0.990 |
| AV274_0055 | AV274_4240 | A0A196SPX8 | A0A196SD57 | DNA-directed RNA polymerase II subunit J. | Transcription elongation factor SPT6. | 0.980 |
| AV274_0055 | AV274_5475 | A0A196SPX8 | A0A196S6Z4 | DNA-directed RNA polymerase II subunit J. | Transcription elongation factor SPT5. | 0.999 |
| AV274_0464 | AV274_0055 | A0A196SNL7 | A0A196SPX8 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | DNA-directed RNA polymerase II subunit J. | 0.999 |
| AV274_0464 | AV274_0521 | A0A196SNL7 | A0A196SNB9 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | RNA polymerase II core subunit. | 0.999 |
| AV274_0464 | AV274_0800 | A0A196SNL7 | A0A196SML5 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | DNA-directed RNA polymerases I, II, and III subunit RPABC2-like protein. | 0.999 |
| AV274_0464 | AV274_1447 | A0A196SNL7 | A0A196SIF8 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | Transcription elongation factor SPT4. | 0.999 |
| AV274_0464 | AV274_2300 | A0A196SNL7 | A0A196SJ67 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| AV274_0464 | AV274_2931 | A0A196SNL7 | A0A196SEB4 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | Transcription elongation factor TFIIS.h. | 0.998 |
| AV274_0464 | AV274_3931 | A0A196SNL7 | A0A196SDF5 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | DNA-directed RNA polymerase II subunit RPB7. | 0.999 |
| AV274_0464 | AV274_4015 | A0A196SNL7 | A0A196SDC4 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | FACT complex subunit SPT16. | 0.991 |
| AV274_0464 | AV274_4240 | A0A196SNL7 | A0A196SD57 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | Transcription elongation factor SPT6. | 0.981 |
| AV274_0464 | AV274_5475 | A0A196SNL7 | A0A196S6Z4 | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | Transcription elongation factor SPT5. | 0.999 |
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