STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AV274_1241ABC transporter C family member 2. (1758 aa)    
Predicted Functional Partners:
AV274_4167
Transmembrane protein.
    
 0.930
AV274_3956
Uncharacterized protein.
   
 0.878
AV274_2397
Inward rectifier potassium channel irk-1.
   
 0.878
AV274_0292
Fibronectin type-III domain-containing protein 3A.
    
 0.794
AV274_2091
Ankyrin repeat family protein.
  
 0.754
AV274_0340
Ankyrin repeat family protein.
  
 0.754
AV274_3864
USP domain-containing protein; Belongs to the peptidase C19 family.
    
  0.730
AV274_5550
ATP-binding Cassette.
  
 0.723
AV274_5619
ABC transporter (Adp1).
  
 0.723
AV274_2802
ABC protein, subfamily ABCG.
  
 0.723
Your Current Organism:
Blastocystis sp. ATCC 50177Nand
NCBI taxonomy Id: 478820
Other names: B. sp. ATCC 50177/Nand II, Blastocystis sp. ATCC 50177, Blastocystis sp. ATCC 50177/Nand II, Blastocystis sp. Nand II, Blastocystis sp. NandII, Blastocystis sp. subtype 1 NandII
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.